Cancer-miRNA Regulatory Network

Compendium of miRNA Target Genes

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Genes Targeted by hsa-mir-216b in SMCL Lung Bhattacharjee Cluster 15 Table contains all genes in the SMCL Lung Bhattacharjee cluster number 15. If a gene harbors a predicted miRNA binding site by one of the three inference methods it is displayed in the final column: M = Weeder-miRvestigator predicted site, P = PITA predicted site and T = TargetScan predicted site. Entrez ID Symbol Description hsa-mir-216b 10196 PRMT3 protein arginine methyltransferase 3 [Source:HGNC Symbol;Acc:30163] zzz999 1822 ATN1 atrophin 1 [Source:HGNC Symbol;Acc:3033] zzz999 10643 IGF2BP3 insulin-like growth factor 2 mRNA binding protein 3 [Source:HGNC Symbol;Acc:28868] zzz999 2909 GRLF1 glucocorticoid receptor DNA binding factor 1 [Source:HGNC Symbol;Acc:4591] zzz999 6733 SRPK2 SRSF protein kinase 2 [Source:HGNC Symbol;Acc:11306] zzz999 2935 GSPT1 G1 to S phase transition 1 [Source:HGNC Symbol;Acc:4621] zzz999 5876 RABGGTB Rab geranylgeranyltransferase, beta subunit [Source:HGNC Symbol;Acc:9796] zzz999 5110 PCMT1 protein-L-isoaspartate (D-aspartate) O-methyltransferase [Source:HGNC Symbol;Acc:8728] zzz999 8454 CUL1 cullin 1 [Source:HGNC Symbol;Acc:2551] zzz999 5781 PTPN11 protein tyrosine phosphatase, non-receptor type 11 [Source:HGNC Symbol;Acc:9644] P T 7054 TH tyrosine hydroxylase [Source:HGNC Symbol;Acc:11782] zzz999 11269 DDX19B DEAD (Asp-Glu-Ala-As) box polypeptide 19B [Source:HGNC Symbol;Acc:2742] P T 1024 CDK8 cyclin-dependent kinase 8 [Source:HGNC Symbol;Acc:1779] zzz999 8050 PDHX pyruvate dehydrogenase complex, component X [Source:HGNC Symbol;Acc:21350] zzz999 3660 IRF2 interferon regulatory factor 2 [Source:HGNC Symbol;Acc:6117] zzz999 7032 TFF2 trefoil factor 2 [Source:HGNC Symbol;Acc:11756] zzz999 320 APBA1 amyloid beta (A4) precursor protein-binding, family A, member 1 [Source:HGNC Symbol;Acc:578] zzz999 3902 LAG3 lymphocyte-activation gene 3 [Source:HGNC Symbol;Acc:6476] zzz999 22827 PUF60 poly-U binding splicing factor 60KDa [Source:HGNC Symbol;Acc:17042] zzz999 6257 RXRB retinoid X receptor, beta [Source:HGNC Symbol;Acc:10478] zzz999 10362 HMG20B high mobility group 20B [Source:HGNC Symbol;Acc:5002] zzz999 10671 DCTN6 dynactin 6 [Source:HGNC Symbol;Acc:16964] zzz999 8445 DYRK2 dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2 [Source:HGNC Symbol;Acc:3093] P T 3239 HOXD13 homeobox D13 [Source:HGNC Symbol;Acc:5136] P T 10063 COX17 COX17 cytochrome c oxidase assembly homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:2264] zzz999 51582 AZIN1 antizyme inhibitor 1 [Source:HGNC Symbol;Acc:16432] zzz999 9722 NOS1AP nitric oxide synthase 1 (neuronal) adaptor protein [Source:HGNC Symbol;Acc:16859] T 84243 ZDHHC18 zinc finger, DHHC-type containing 18 [Source:HGNC Symbol;Acc:20712] zzz999 3761 KCNJ4 potassium inwardly-rectifying channel, subfamily J, member 4 [Source:HGNC Symbol;Acc:6265] zzz999 26135 SERBP1 SERPINE1 mRNA binding protein 1 [Source:HGNC Symbol;Acc:17860] P T 9125 RQCD1 RCD1 required for cell differentiation1 homolog (S. pombe) [Source:HGNC Symbol;Acc:10445] zzz999 7465 WEE1 WEE1 homolog (S. pombe) [Source:HGNC Symbol;Acc:12761] zzz999 9926 LPGAT1 lysophosphatidylglycerol acyltransferase 1 [Source:HGNC Symbol;Acc:28985] T 1014 CDH16 cadherin 16, KSP-cadherin [Source:HGNC Symbol;Acc:1755] zzz999 4174 MCM5 minichromosome maintenance complex component 5 [Source:HGNC Symbol;Acc:6948] zzz999 23607 CD2AP CD2-associated protein [Source:HGNC Symbol;Acc:14258] zzz999 27242 TNFRSF21 tumor necrosis factor receptor superfamily, member 21 [Source:HGNC Symbol;Acc:13469] zzz999 9703 KIAA0100 KIAA0100 [Source:HGNC Symbol;Acc:28960] zzz999 9166 EBAG9 estrogen receptor binding site associated, antigen, 9 [Source:HGNC Symbol;Acc:3123] zzz999 25797 QPCT glutaminyl-peptide cyclotransferase [Source:HGNC Symbol;Acc:9753] zzz999 6000 RGS7 regulator of G-protein signaling 7 [Source:HGNC Symbol;Acc:10003] zzz999 4673 NAP1L1 nucleosome assembly protein 1-like 1 [Source:HGNC Symbol;Acc:7637] zzz999 9261 MAPKAPK2 mitogen-activated protein kinase-activated protein kinase 2 [Source:HGNC Symbol;Acc:6887] zzz999 10159 ATP6AP2 ATPase, H+ transporting, lysosomal accessory protein 2 [Source:HGNC Symbol;Acc:18305] zzz999 6508 SLC4A3 solute carrier family 4, anion exchanger, member 3 [Source:HGNC Symbol;Acc:11029] zzz999 10863 ADAM28 ADAM metallopeptidase domain 28 [Source:HGNC Symbol;Acc:206] zzz999 2166 FAAH fatty acid amide hydrolase [Source:HGNC Symbol;Acc:3553] zzz999 5962 RDX radixin [Source:HGNC Symbol;Acc:9944] P T 1810 DR1 down-regulator of transcription 1, TBP-binding (negative cofactor 2) [Source:HGNC Symbol;Acc:3017] zzz999 5634 PRPS2 phosphoribosyl pyrophosphate synthetase 2 [Source:HGNC Symbol;Acc:9465] zzz999 11329 STK38 serine/threonine kinase 38 [Source:HGNC Symbol;Acc:17847] zzz999 5862 RAB2A RAB2A, member RAS oncogene family [Source:HGNC Symbol;Acc:9763] zzz999 9230 RAB11B RAB11B, member RAS oncogene family [Source:HGNC Symbol;Acc:9761] zzz999 10084 PQBP1 polyglutamine binding protein 1 [Source:HGNC Symbol;Acc:9330] zzz999 2729 GCLC glutamate-cysteine ligase, catalytic subunit [Source:HGNC Symbol;Acc:4311] P T 5601 MAPK9 mitogen-activated protein kinase 9 [Source:HGNC Symbol;Acc:6886] P T 4684 NCAM1 neural cell adhesion molecule 1 [Source:HGNC Symbol;Acc:7656] zzz999 10900 RUNDC3A RUN domain containing 3A [Source:HGNC Symbol;Acc:16984] zzz999 26005 C2CD3 C2 calcium-dependent domain containing 3 [Source:HGNC Symbol;Acc:24564] zzz999 4133 MAP2 microtubule-associated protein 2 [Source:HGNC Symbol;Acc:6839] T 130916 MTERFD2 MTERF domain containing 2 [Source:HGNC Symbol;Acc:28785] T 22889 KIAA0907 KIAA0907 [Source:HGNC Symbol;Acc:29145] T 10542 HBXIP hepatitis B virus x interacting protein [Source:HGNC Symbol;Acc:17955] zzz999 8502 PKP4 plakophilin 4 [Source:HGNC Symbol;Acc:9026] P T 1349 COX7B cytochrome c oxidase subunit VIIb [Source:HGNC Symbol;Acc:2291] zzz999 55174 INTS10 integrator complex subunit 10 [Source:HGNC Symbol;Acc:25548] zzz999 22796 COG2 component of oligomeric golgi complex 2 [Source:HGNC Symbol;Acc:6546] zzz999 2071 ERCC3 excision repair cross-complementing rodent repair deficiency, complementation group 3 (xeroderma pigmentosum group B complementing) [Source:HGNC Symbol;Acc:3435] zzz999 11333 PDAP1 PDGFA associated protein 1 [Source:HGNC Symbol;Acc:14634] zzz999 10527 IPO7 importin 7 [Source:HGNC Symbol;Acc:9852] zzz999 11338 U2AF2 U2 small nuclear RNA auxiliary factor 2 [Source:HGNC Symbol;Acc:23156] zzz999 5967 REG1A regenerating islet-derived 1 alpha [Source:HGNC Symbol;Acc:9951] zzz999 23355 VPS8 vacuolar protein sorting 8 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:29122] zzz999 54874 FNBP1L formin binding protein 1-like [Source:HGNC Symbol;Acc:20851] zzz999 6713 SQLE squalene epoxidase [Source:HGNC Symbol;Acc:11279] zzz999 23138 N4BP3 NEDD4 binding protein 3 [Source:HGNC Symbol;Acc:29852] zzz999 60496 AASDHPPT aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase [Source:HGNC Symbol;Acc:14235] zzz999 8943 AP3D1 adaptor-related protein complex 3, delta 1 subunit [Source:HGNC Symbol;Acc:568] zzz999 5567 PRKACB protein kinase, cAMP-dependent, catalytic, beta [Source:HGNC Symbol;Acc:9381] zzz999

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